[ABCDEFGHIJKL](ab)
- Classes: Low resolution protein structures
- Folds: RNA polymerase
- Superfamilies: RNA polymerase
- Families: RNA polymerase
- Protein Domains: Complete 12-subunit RNA polymerase II complex
- Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
PDB Entries
| PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | ||
|---|---|---|---|---|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level | |||||
| 1nik | [ABCDEFGHIJ] | [A10] | [A10] | 4.1 | ZN:ZINC ION | ||
| 1nt9 | [ABCDEFGHIJKL] | [A12] | [A12] | 4.2 | |||
| 1pqv | [ABCDEFGHIJKLM] | [A13] | [A13] | 3.8 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1r5u | [ABCDEFGHIJ] | [A10] | [A10] | 4.5 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1r9s | [ABCDEFGHIJ](A)(a) | [A10](A)(a) | [A10](A)(a) | 4.25 | MG:MAGNESIUM ION UTP:URIDINE 5___sq___-TRIPHOSPHATE ZN:ZINC ION | ||
| 1r9t | [ABCDEFGHIJ](AB)(a) | [A10](AB)(a) | [A10](AB)(a) | 3.5 | ATP:ADENOSINE-5___sq___-TRIPHOSPHATE MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1sfo | [ABCDEFGHIJ](A)(a) | [A10](A)(a) | [A10](A)(a) | 3.61 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1wcm | [ABCDEFGHIJKL] | [A12] | [A12] | 3.8 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1y1v | [ABCDEFGHIJKLM] | [A13] | [A13] | 3.8 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1y1w | [ABCDEFGHIJKL](AB)(a) | [A12](AB)(a) | [A12](AB)(a) | 4 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1y1y | [ABCDEFGHIJKLM](A)(a) | [A13](A)(a) | [A13](A)(a) | 4 | |||
| 1y77 | [ABCDEFGHIJKL](AB)(a) | [A12](AB)(a) | [A12](AB)(a) | 4.5 | G2P:PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER MG:MAGNESIUM ION ZN:ZINC ION | ||
| 2b63 | [ABCDEFGHIJKL](a) | [A2BCDEFGHIJK](a) | [A2BCDEFGHIJK](a) | 3.8 | 5BU:5-BROMO-URIDINE-5___sq___-MONOPHOSPHATE MG:MAGNESIUM ION ZN:ZINC ION | ||
| 2b8k | [ABCDEFGHIJKL] | [ABCDEFGHIJKL] | [ABCDEFGHIJKL] | 4.15 | ZN:ZINC ION | ||
| 2ja5 | [ABCDEFGHIJKL](A)(a) | [ABCDEFGHIJKL](A)(a) | [ABCDEFGHIJKL](A)(a) | 3.8 | BRU:5-BROMO-2___sq___-DEOXYURIDINE-5___sq___-MONOPHOSPHATE MG:MAGNESIUM ION ZN:ZINC ION | ||
| 2ja6 | [ABCDEFGHIJKL](AB)(a) | [ABCDEFGHIJKL](AB)(a) | [ABCDEFGHIJKL](AB)(a) | 4 | BRU:5-BROMO-2___sq___-DEOXYURIDINE-5___sq___-MONOPHOSPHATE MG:MAGNESIUM ION TT:[(1R,3R,4S,9R,10S,12R,15AS,15BR,18BR,18CS)-10-HYDROXY-15A,15B-DIMETHYL-13,15,16,18-TETRAOXOHEXADECAHYDRO-8H-9,12-EPOXY-1,4-METHANO-2,5,7-TRIOXA-12A,14,17,18A-TETRAAZACYCLOHEXADECA[1,2,3,4-DEF]BIPHENYLEN-3-YL]METHYL DIHYDROGEN PHOSPHATE ZN:ZINC ION | ||
| 2ja7 | [ABCDEFGHIJKL](AB)(a) | [ABCDEFGHIJKL](AB)(a) | [ABCDEFGHIJKL](AB)(a) | 3.8 | BRU:5-BROMO-2___sq___-DEOXYURIDINE-5___sq___-MONOPHOSPHATE MG:MAGNESIUM ION TT:[(1R,3R,4S,9R,10S,12R,15AS,15BR,18BR,18CS)-10-HYDROXY-15A,15B-DIMETHYL-13,15,16,18-TETRAOXOHEXADECAHYDRO-8H-9,12-EPOXY-1,4-METHANO-2,5,7-TRIOXA-12A,14,17,18A-TETRAAZACYCLOHEXADECA[1,2,3,4-DEF]BIPHENYLEN-3-YL]METHYL DIHYDROGEN PHOSPHATE ZN:ZINC ION | ||
| 2ja8 | [ABCDEFGHIJKL](AB)(a) | [ABCDEFGHIJKL](AB)(a) | [ABCDEFGHIJKL](AB)(a) | 3.8 | BRU:5-BROMO-2___sq___-DEOXYURIDINE-5___sq___-MONOPHOSPHATE MG:MAGNESIUM ION TT:[(1R,3R,4S,9R,10S,12R,15AS,15BR,18BR,18CS)-10-HYDROXY-15A,15B-DIMETHYL-13,15,16,18-TETRAOXOHEXADECAHYDRO-8H-9,12-EPOXY-1,4-METHANO-2,5,7-TRIOXA-12A,14,17,18A-TETRAAZACYCLOHEXADECA[1,2,3,4-DEF]BIPHENYLEN-3-YL]METHYL DIHYDROGEN PHOSPHATE ZN:ZINC ION | ||
| 2r7z | [ABCDEFGHIJKL](AB)(a) | [A4BCDEFGHI](AB)(a) | [A4BCDEFGHI](AB)(a) | 3.8 | CPT:CISPLATIN MG:MAGNESIUM ION ZN:ZINC ION | ||
| 2r92 | [ABCDEFGHIJKL](ab) | [A4BCDEFGHI](ab) | [A4BCDEFGHI](ab) | 3.8 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 2r93 | [ABCDEFGHIJKL](a) | [A4BCDEFGHI](a) | [A4BCDEFGHI](a) | 4 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 2vum | [ABCDEFGHIJKL][a](AB)(a) | [A4BCDEFGHI][a](AB)(a) | [A4BCDEFGHI][a](AB)(a) | 3.4 | BRU:5-BROMO-2___sq___-DEOXYURIDINE-5___sq___-MONOPHOSPHATE CSX:S-OXY CYSTEINE HYP:4-HYDROXYPROLINE ILX:4,5-DIHYDROXYISOLEUCINE MG:MAGNESIUM ION TRX:6-HYDROXYTRYPTOPHAN ZN:ZINC ION | ||
| 3cqz | [ABCDEFGHIJ][a] | [ABCDEFGHIJ][a] | [ABCDEFGHIJ][a] | 2.8 | CSX:S-OXY CYSTEINE HYP:4-HYDROXYPROLINE ILX:4,5-DIHYDROXYISOLEUCINE TRX:6-HYDROXYTRYPTOPHAN ZN:ZINC ION | ||
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
